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RN7SKP249 RN7SK pseudogene 249 [ Homo sapiens (human) ]

Gene ID: 106480910, updated on 17-Sep-2024

Summary

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Official Symbol
RN7SKP249provided by HGNC
Official Full Name
RN7SK pseudogene 249provided by HGNC
Primary source
HGNC:HGNC:45973
See related
AllianceGenome:HGNC:45973
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RN7SKP249 in Genome Data Viewer
Location:
8q22.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (101137959..101138192)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (102263693..102263926)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (102150187..102150420)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene STAT1 regulated ILF2 complex interacting lncRNA Neighboring gene Sharpr-MPRA regulatory region 4389 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19429 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:102109675-102110204 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:102110205-102110732 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:102120910-102121840 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:102121841-102122769 Neighboring gene long intergenic non-protein coding RNA 3044 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:102138473-102138995 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:102138996-102139519 Neighboring gene long intergenic non-protein coding RNA 3090 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:102149216-102149811 Neighboring gene uncharacterized LOC105375676 Neighboring gene NFE2L2 motif-containing MPRA enhancer 220/221 Neighboring gene Sharpr-MPRA regulatory region 12327 Neighboring gene Sharpr-MPRA regulatory region 12099 Neighboring gene Sharpr-MPRA regulatory region 1163 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27728 Neighboring gene ZNF706 neighboring transcript 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, 7SK small nuclear pseudogene 249

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043018.1 

    Range
    101..334
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    101137959..101138192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    102263693..102263926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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