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RN7SL798P RNA, 7SL, cytoplasmic 798, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480533, updated on 17-Sep-2024

Summary

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Official Symbol
RN7SL798Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 798, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46814
See related
Ensembl:ENSG00000240905 AllianceGenome:HGNC:46814
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RN7SL798P in Genome Data Viewer
Location:
8q12.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (55980240..55980540, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (56357390..56357690, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (56892799..56893099, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27376 Neighboring gene trimethylguanosine synthase 1 Neighboring gene MPRA-validated peak7024 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27377 Neighboring gene Sharpr-MPRA regulatory region 11739 Neighboring gene Sharpr-MPRA regulatory region 4705 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27378 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27379 Neighboring gene CRISPRi-validated cis-regulatory element chr8.1663 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27380 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27381 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19203 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27382 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19204 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19205 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19206 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27383 Neighboring gene Sharpr-MPRA regulatory region 4485 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27385 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27386 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19207 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:56827131-56827631 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:56826630-56827130 Neighboring gene LYN proto-oncogene, Src family tyrosine kinase Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27387 Neighboring gene Sharpr-MPRA regulatory region 838 Neighboring gene small nucleolar RNA, H/ACA box 1B Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27388 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:56843083-56843621 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19208 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27390 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:56852106-56852621 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27392 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:56892491-56892991 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:56893036-56893536 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:56897215-56897411 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27393 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27394 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27395 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27396 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27397 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27398 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19209 Neighboring gene RNA, 7SL, cytoplasmic 323, pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chr8:56960415-56960946 Neighboring gene proteasome 26S subunit, ATPase, 6 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044082.1 

    Range
    101..401
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    55980240..55980540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    56357390..56357690 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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