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RN7SL401P RNA, 7SL, cytoplasmic 401, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480507, updated on 17-Sep-2024

Summary

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Official Symbol
RN7SL401Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 401, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46417
See related
Ensembl:ENSG00000241866 AllianceGenome:HGNC:46417
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RN7SL401P in Genome Data Viewer
Location:
18q22.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (73744935..73745232)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (73965992..73966289)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (71412170..71412467)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene chr18 t(4;18)(q35;q18) HERV-H recombination region Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_49950 Neighboring gene long intergenic non-protein coding RNA 2582 Neighboring gene uncharacterized LOC105372190 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_49980 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:71098754-71099424 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_49987 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_50021 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr18:71230790-71231989 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:71358526-71359026 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:71359027-71359527 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr18:71362654-71363853 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr18:71382077-71383276 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr18:71384186-71385385 Neighboring gene uncharacterized LOC105372191 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:71510186-71510359 Neighboring gene uncharacterized LOC124904358

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043889.1 

    Range
    101..398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    73744935..73745232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    73965992..73966289
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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