U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

B3GNTL1P2 B3GNTL1 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 106480419, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
B3GNTL1P2provided by HGNC
Official Full Name
B3GNTL1 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:51318
See related
Ensembl:ENSG00000271328 AllianceGenome:HGNC:51318
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
6p12.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (47368943..47369230)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (47206083..47206370)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (47336679..47336966)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375081 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24655 Neighboring gene MPRA-validated peak5831 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24656 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24657 Neighboring gene TNF receptor superfamily member 21 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:47252971-47254170 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24658 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:47276592-47277314 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24659 Neighboring gene Sharpr-MPRA regulatory region 4111 Neighboring gene NANOG hESC enhancer GRCh37_chr6:47306925-47307426 Neighboring gene uncharacterized LOC105375082 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24660 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24661 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24662 Neighboring gene CRISPRi-validated cis-regulatory element chr6.3292 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:47411751-47412484 Neighboring gene Sharpr-MPRA regulatory region 15024 Neighboring gene MPRA-validated peak5833 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17275 Neighboring gene CD2AP divergent transcript Neighboring gene CD2 associated protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

Go to the top of the page Help

Other Names

  • UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 pseudogene 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043195.1 

    Range
    101..388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    47368943..47369230
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    47206083..47206370
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases