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SNRPCP20 small nuclear ribonucleoprotein polypeptide C pseudogene 20 [ Homo sapiens (human) ]

Gene ID: 106480292, updated on 17-Sep-2024

Summary

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Official Symbol
SNRPCP20provided by HGNC
Official Full Name
small nuclear ribonucleoprotein polypeptide C pseudogene 20provided by HGNC
Primary source
HGNC:HGNC:49835
See related
AllianceGenome:HGNC:49835
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See SNRPCP20 in Genome Data Viewer
Location:
16p13.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (5289142..5289426, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (5318808..5319092, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (5339143..5339427, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S24-like Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr16:5371684-5372883 Neighboring gene RPS3A pseudogene 48 Neighboring gene RNA binding fox-1 homolog 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:5496759-5497327 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:5500131-5500853 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:5500854-5501575 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr16:5609581-5610780 Neighboring gene nucleophosmin 1 pseudogene 3 Neighboring gene long intergenic non-protein coding RNA 1570

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044195.2 

    Range
    101..385
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    5289142..5289426 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    5318808..5319092 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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