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RNU2-56P RNA, U2 small nuclear 56, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480221, updated on 17-Sep-2024

Summary

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Official Symbol
RNU2-56Pprovided by HGNC
Official Full Name
RNA, U2 small nuclear 56, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48549
See related
Ensembl:ENSG00000252635 AllianceGenome:HGNC:48549
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU2-56P in Genome Data Viewer
Location:
20p11.23
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (18265692..18265879, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (18316787..18316974, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (18246336..18246523, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:18205955-18206454 Neighboring gene GGCT pseudogene 2 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr20:18232893-18234092 Neighboring gene RNA, 7SL, cytoplasmic 14, pseudogene Neighboring gene uncharacterized LOC124904876 Neighboring gene uncharacterized LOC105372551 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17581 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:18268873-18269778 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17583 Neighboring gene zinc finger protein 133 Neighboring gene RN7SK pseudogene 74

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043665.1 

    Range
    101..288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    18265692..18265879 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    18316787..18316974 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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