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RNU2-21P RNA, U2 small nuclear 21, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480206, updated on 17-Sep-2024

Summary

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Official Symbol
RNU2-21Pprovided by HGNC
Official Full Name
RNA, U2 small nuclear 21, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48514
See related
Ensembl:ENSG00000222300 AllianceGenome:HGNC:48514
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU2-21P in Genome Data Viewer
Location:
2q24.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (158935798..158935985, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (159397836..159398023, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (159792310..159792497, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chr2:159736430-159736541 Neighboring gene tRNA-Glu (anticodon CTC) 7-1 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_53476 Neighboring gene olfactory receptor family 7 subfamily E member 90 pseudogene Neighboring gene VISTA enhancer hs1477 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_53495 Neighboring gene NANOG hESC enhancer GRCh37_chr2:159819504-159820084 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12040 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12041 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16681 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr2:159851555-159852212 Neighboring gene tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 Neighboring gene basic transcription factor 3 like 4 pseudogene 2 Neighboring gene RNA, U6 small nuclear 580, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043549.1 

    Range
    101..288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    158935798..158935985 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    159397836..159398023 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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