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RNU6-488P RNA, U6 small nuclear 488, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479782, updated on 17-Sep-2024

Summary

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Official Symbol
RNU6-488Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 488, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47451
See related
Ensembl:ENSG00000251727 AllianceGenome:HGNC:47451
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-488P in Genome Data Viewer
Location:
3q11.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (93843764..93843862)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (96541950..96542048)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (93562608..93562706)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124909499 Neighboring gene DNA primase large subunit-like Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:93505591-93506187 Neighboring gene OCT4 hESC enhancer GRCh37_chr3:93515463-93515964 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:93624998-93625498 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:93625499-93625999 Neighboring gene Sharpr-MPRA regulatory region 12381 Neighboring gene RNA, U6 small nuclear 511, pseudogene Neighboring gene heat shock protein family E (Hsp10) member 1 pseudogene 17 Neighboring gene protein S

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044206.1 

    Range
    101..199
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    93843764..93843862
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    96541950..96542048
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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