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LOC106478317 methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like [ Limulus polyphemus (Atlantic horseshoe crab) ]

Gene ID: 106478317, updated on 21-Dec-2023

Summary

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Gene symbol
LOC106478317
Gene description
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like
See related
EnsemblRapid:LOC106478317
Gene type
protein coding
RefSeq status
MODEL
Organism
Limulus polyphemus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Merostomata; Xiphosura; Limulidae; Limulus
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Genomic context

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See LOC106478317 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Limulus_polyphemus-2.1.2 (GCF_000517525.1) Unplaced Scaffold NW_013665809.1 (440703..456921, complement)

NW_013665809.1Genomic Context describing neighboring genes Neighboring gene integrin beta-PS-like Neighboring gene uncharacterized LOC106478310 Neighboring gene telomere-associated protein RIF1-like Neighboring gene telomere-associated protein RIF1-like Neighboring gene 5'-AMP-activated protein kinase subunit gamma-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013665809 Unplaced Scaffold Reference Limulus_polyphemus-2.1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Limulus polyphemus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Limulus_polyphemus-2.1.2 Primary Assembly

Genomic

  1. NW_013665809.1 Reference Limulus_polyphemus-2.1.2 Primary Assembly

    Range
    440703..456921 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013938852.2 → XP_013794306.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like isoform X1

    Related
    XP_013794306.1, XM_013938852.2
    Conserved Domains (1) summary
    pfam10229
    Location:50 → 291
    DUF2246; Uncharacterized conserved protein (DUF2246)

  2. XM_013938851.2 → XP_013794305.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like isoform X1

    Related
    XP_013794305.1, XM_013938851.2
    Conserved Domains (1) summary
    pfam10229
    Location:50 → 291
    DUF2246; Uncharacterized conserved protein (DUF2246)

  3. XM_022381906.1 → XP_022237614.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like isoform X2

    Related
    XP_022237614.1, XM_022381906.1
    Conserved Domains (1) summary
    pfam10229
    Location:19 → 260
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  4. XM_013938853.2 → XP_013794307.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like isoform X1

    Related
    XP_013794307.1, XM_013938853.2
    Conserved Domains (1) summary
    pfam10229
    Location:50 → 291
    DUF2246; Uncharacterized conserved protein (DUF2246)

  5. XM_022381907.1 → XP_022237615.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial-like isoform X2

    Related
    XP_022237615.1, XM_022381907.1
    Conserved Domains (1) summary
    pfam10229
    Location:19 → 260
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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