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LOC106469962 zeta-sarcoglycan-like [ Limulus polyphemus (Atlantic horseshoe crab) ]

Gene ID: 106469962, updated on 21-Dec-2023

Summary

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Gene symbol
LOC106469962
Gene description
zeta-sarcoglycan-like
See related
EnsemblRapid:LOC106469962
Gene type
protein coding
RefSeq status
MODEL
Organism
Limulus polyphemus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Merostomata; Xiphosura; Limulidae; Limulus
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Genomic context

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See LOC106469962 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Limulus_polyphemus-2.1.2 (GCF_000517525.1) Unplaced Scaffold NW_013669355.1 (83398..112255, complement)

NW_013669355.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013669355 Unplaced Scaffold Reference Limulus_polyphemus-2.1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zeta-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Limulus polyphemus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Limulus_polyphemus-2.1.2 Primary Assembly

Genomic

  1. NW_013669355.1 Reference Limulus_polyphemus-2.1.2 Primary Assembly

    Range
    83398..112255 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013930482.2 → XP_013785936.2  zeta-sarcoglycan-like

    Related
    XP_013785936.2, XM_013930482.2
    Conserved Domains (1) summary
    pfam04790
    Location:20 → 121
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

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