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LOC106467537 irregular chiasm C-roughest protein-like [ Limulus polyphemus (Atlantic horseshoe crab) ]

Gene ID: 106467537, updated on 21-Dec-2023

Summary

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Gene symbol
LOC106467537
Gene description
irregular chiasm C-roughest protein-like
See related
EnsemblRapid:LOC106467537
Gene type
protein coding
RefSeq status
MODEL
Organism
Limulus polyphemus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Merostomata; Xiphosura; Limulidae; Limulus
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Genomic context

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See LOC106467537 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Limulus_polyphemus-2.1.2 (GCF_000517525.1) Unplaced Scaffold NW_013665612.1 (1266571..1318275)

NW_013665612.1Genomic Context describing neighboring genes Neighboring gene hemicentin-2-like Neighboring gene hemicentin-1-like Neighboring gene upstream stimulatory factor 2-like Neighboring gene proprotein convertase subtilisin/kexin type 7-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013665612 Unplaced Scaffold Reference Limulus_polyphemus-2.1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
irregular chiasm C-roughest protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Limulus polyphemus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Limulus_polyphemus-2.1.2 Primary Assembly

Genomic

  1. NW_013665612.1 Reference Limulus_polyphemus-2.1.2 Primary Assembly

    Range
    1266571..1318275
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022396791.1 → XP_022252499.1  irregular chiasm C-roughest protein-like

    Related
    XP_022252499.1, XM_022396791.1
    Conserved Domains (3) summary
    pfam07686
    Location:39 → 134
    V-set; Immunoglobulin V-set domain
    pfam13927
    Location:328 → 394
    Ig_3; Immunoglobulin domain
    cl11960
    Location:411 → 507
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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