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GlyS glycogen [starch] synthase [ Limulus polyphemus (Atlantic horseshoe crab) ]

Gene ID: 106459638, updated on 18-Sep-2024

Summary

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Gene symbol
GlyS
Gene description
glycogen [starch] synthase
See related
EnsemblRapid:LOC106459638
Gene type
protein coding
RefSeq status
MODEL
Organism
Limulus polyphemus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Merostomata; Xiphosura; Limulidae; Limulus
Orthologs
fruit fly all
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Genomic context

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See GlyS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Limulus_polyphemus-2.1.2 (GCF_000517525.1) Unplaced Scaffold NW_013666251.1 (215762..260845, complement)

NW_013666251.1Genomic Context describing neighboring genes Neighboring gene RAB3 GTPase activating protein subunit 1 Neighboring gene uncharacterized LOC111085821 Neighboring gene uncharacterized LOC111085823 Neighboring gene hsp70-binding protein 1-like Neighboring gene fuzzy planar cell polarity protein-like protein Neighboring gene uncharacterized LOC106459637

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013666251 Unplaced Scaffold Reference Limulus_polyphemus-2.1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Resolving arthropod phylogeny: exploring phylogenetic signal within 41 kb of protein-coding nuclear gene sequence. Regier JC, et al. Syst Biol, 2008 Dec. PMID 19085333
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen [starch] synthase
Names
putative glycogen synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Limulus polyphemus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Limulus_polyphemus-2.1.2 Primary Assembly

Genomic

  1. NW_013666251.1 Reference Limulus_polyphemus-2.1.2 Primary Assembly

    Range
    215762..260845 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013919270.2 → XP_013774724.1  glycogen [starch] synthase

    Related
    XP_013774724.1, XM_013919270.2
    Conserved Domains (2) summary
    cd03793
    Location:30 → 622
    GT1_Glycogen_synthase_GSY2_like; Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the ...
    pfam05693
    Location:35 → 672
    Glycogen_syn; Glycogen synthase
Nucleotide Protein
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