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LOC106453178 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [ Brassica napus (rape) ]

Gene ID: 106453178, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106453178
Gene description
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106453178 in Genome Data Viewer
Location:
chromosome: C8
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C8 NC_063451.1 (25171695..25174955)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C8 NC_027774.2 (16278280..16281305)

Chromosome C8 - NC_063451.1Genomic Context describing neighboring genes Neighboring gene putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 Neighboring gene uncharacterized LOC125591927 Neighboring gene mannosylglycoprotein endo-beta-mannosidase Neighboring gene sucrose nonfermenting 4-like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5
Names
BnaCnng06530D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063451.1 Reference Da-Ae Primary Assembly

    Range
    25171695..25174955
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013895435.3 → XP_013750889.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5

    UniProtKB/TrEMBL
    A0A078H412
    Conserved Domains (1) summary
    cd02537
    Location:273 → 511
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
Heading Accession and Version

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