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LOC106450775 probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase [ Brassica napus (rape) ]

Gene ID: 106450775, updated on 10-Oct-2024

Summary

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Gene symbol
LOC106450775
Gene description
probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase
Locus tag
HID58_058393
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106450775 in Genome Data Viewer
Location:
chromosome: C4
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C4 NC_063447.1 (4473832..4475779, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A5 NC_027761.2 (2705325..2707295, complement)

Chromosome C4 - NC_063447.1Genomic Context describing neighboring genes Neighboring gene protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic-like Neighboring gene 10 kDa chaperonin 2, chloroplastic Neighboring gene F-box/kelch-repeat protein At3g18720-like Neighboring gene FCS-Like Zinc finger 3 Neighboring gene putative casein kinase II subunit beta-4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase
Names
BnaA05g04210D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063447.1 Reference Da-Ae Primary Assembly

    Range
    4473832..4475779 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013892534.3 → XP_013747988.2  probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase

    UniProtKB/TrEMBL
    A0A078IE24
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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