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LOC106447408 galacturonosyltransferase 8 [ Brassica napus (rape) ]

Gene ID: 106447408, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106447408
Gene description
galacturonosyltransferase 8
Locus tag
HID58_054376
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106447408 in Genome Data Viewer
Location:
chromosome: C3
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C3 NC_063446.1 (33496125..33498265)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A4 NC_027760.2 (19570337..19572440)

Chromosome C3 - NC_063446.1Genomic Context describing neighboring genes Neighboring gene cell division control protein 45 homolog Neighboring gene oleoyl-acyl carrier protein thioesterase 1, chloroplastic-like Neighboring gene ER lumen protein-retaining receptor erd-2.2 Neighboring gene uncharacterized LOC106447411

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galacturonosyltransferase 8
Names
BnaC03g74220D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063446.1 Reference Da-Ae Primary Assembly

    Range
    33496125..33498265
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013889324.3 → XP_013744778.1  galacturonosyltransferase 8

    UniProtKB/TrEMBL
    A0A078J8A3, A0A816YFG3
    Conserved Domains (1) summary
    PLN02523
    Location:1 → 553
    PLN02523; galacturonosyltransferase
Nucleotide Protein
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