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LOC106445283 inositol phosphorylceramide glucuronosyltransferase 1 [ Brassica napus (rape) ]

Gene ID: 106445283, updated on 10-Oct-2024

Summary

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Gene symbol
LOC106445283
Gene description
inositol phosphorylceramide glucuronosyltransferase 1
Locus tag
HID58_044653
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106445283 in Genome Data Viewer
Location:
chromosome: C1
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C1 NC_063444.1 (50242253..50245126)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) Unplaced Scaffold NW_019168631.1 (51568..54713, complement)

Chromosome C1 - NC_063444.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L23 Neighboring gene uncharacterized LOC125580733 Neighboring gene uncharacterized LOC125580734 Neighboring gene uncharacterized LOC125580736 Neighboring gene uncharacterized LOC106365672

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol phosphorylceramide glucuronosyltransferase 1
Names
BnaC01g40120D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063444.1 Reference Da-Ae Primary Assembly

    Range
    50242253..50245126
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048745759.1 → XP_048601716.1  inositol phosphorylceramide glucuronosyltransferase 1

    UniProtKB/TrEMBL
    A0A078G6U8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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