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LOC106443987 UDP-arabinopyranose mutase 3 [ Brassica napus (rape) ]

Gene ID: 106443987, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106443987
Gene description
UDP-arabinopyranose mutase 3
Locus tag
HID58_011153
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106443987 in Genome Data Viewer
Location:
chromosome: A3
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A3 NC_063436.1 (16472771..16474515)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A3 NC_027759.2 (22462276..22464097)

Chromosome A3 - NC_063436.1Genomic Context describing neighboring genes Neighboring gene LIMR family protein At3g08930 Neighboring gene dnaJ homolog subfamily B member 1 Neighboring gene uncharacterized protein At5g01610 Neighboring gene kinetochore protein SPC24 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-arabinopyranose mutase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063436.1 Reference Da-Ae Primary Assembly

    Range
    16472771..16474515
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022716316.2 → XP_022572037.2  UDP-arabinopyranose mutase 3

Nucleotide Protein
Heading Accession and Version

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