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LOC106439064 putative fucosyltransferase-like protein [ Brassica napus (rape) ]

Gene ID: 106439064, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106439064
Gene description
putative fucosyltransferase-like protein
Locus tag
HID58_028551
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106439064 in Genome Data Viewer
Location:
chromosome: A8
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A8 NC_063441.1 (2498114..2500793, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A3 NC_027759.2 (27844232..27846969, complement)

Chromosome A8 - NC_063441.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene uncharacterized LOC106348050 Neighboring gene PI-PLC X domain-containing protein At5g67130-like Neighboring gene uncharacterized protein At4g06744

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative fucosyltransferase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063441.1 Reference Da-Ae Primary Assembly

    Range
    2498114..2500793 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048737560.1 → XP_048593517.1  putative fucosyltransferase-like protein

    UniProtKB/TrEMBL
    A0A078FU67

  2. XM_013880410.3 → XP_013735864.2  putative fucosyltransferase-like protein

    UniProtKB/TrEMBL
    A0A078FU67
Nucleotide Protein
Heading Accession and Version

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