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LOC106438915 probable galacturonosyltransferase 13 [ Brassica napus (rape) ]

Gene ID: 106438915, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106438915
Gene description
probable galacturonosyltransferase 13
Locus tag
HID58_010872
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106438915 in Genome Data Viewer
Location:
chromosome: A3
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A3 NC_063436.1 (15040825..15045561, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A3 NC_027759.2 (21122680..21125998, complement)

Chromosome A3 - NC_063436.1Genomic Context describing neighboring genes Neighboring gene probable WRKY transcription factor 58 Neighboring gene uncharacterized LOC125606956 Neighboring gene membrane-anchored ubiquitin-fold protein 1 Neighboring gene uncharacterized LOC106386211 Neighboring gene protein WVD2-like 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 13
Names
BnaA03g27680D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063436.1 Reference Da-Ae Primary Assembly

    Range
    15040825..15045561 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013880209.3 → XP_013735663.2  probable galacturonosyltransferase 13 isoform X2

  2. XM_013880210.3 → XP_013735664.2  probable galacturonosyltransferase 13 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases