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LOC106438652 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like [ Brassica napus (rape) ]

Gene ID: 106438652, updated on 10-Oct-2024

Summary

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Gene symbol
LOC106438652
Gene description
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106438652 in Genome Data Viewer
Location:
chromosome: A3
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A3 NC_063436.1 (14425497..14427241)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A3 NC_027759.2 (20108070..20110518)

Chromosome A3 - NC_063436.1Genomic Context describing neighboring genes Neighboring gene nifU-like protein 1, chloroplastic Neighboring gene UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like Neighboring gene nitrogen regulatory protein P-II homolog Neighboring gene uncharacterized LOC106438648 Neighboring gene protein NIM1-INTERACTING 1-like Neighboring gene polygalacturonase At1g48100

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063436.1 Reference Da-Ae Primary Assembly

    Range
    14425497..14427241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013879896.3 → XP_013735350.2  UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like

    UniProtKB/TrEMBL
    A0A816VXE4
Nucleotide Protein
Heading Accession and Version

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