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LOC106421663 fructose-1,6-bisphosphatase, chloroplastic [ Brassica napus (rape) ]

Gene ID: 106421663, updated on 6-Jun-2024

Summary

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Gene symbol
LOC106421663
Gene description
fructose-1,6-bisphosphatase, chloroplastic
Locus tag
HID58_061056
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Also known as
FBP; FBPase
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Genomic context

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See LOC106421663 in Genome Data Viewer
Location:
chromosome: C4
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C4 NC_063447.1 (36641726..36648423, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C7 NC_027773.2 (34367053..34367491, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) Unplaced Scaffold NW_019169019.1 (720..1874)

Chromosome C4 - NC_063447.1Genomic Context describing neighboring genes Neighboring gene ataxin-3 homolog Neighboring gene mitochondrial uncoupling protein 1-like Neighboring gene uncharacterized BNAC04G26560D Neighboring gene uncharacterized LOC125585579

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fructose 1,6-bisphosphate 1-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fructose 1,6-bisphosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fructose 6-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fructose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sucrose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fructose-1,6-bisphosphatase, chloroplastic
Names
BnaC04g26530D
D-fructose-1,6-bisphosphate 1-phosphohydrolase
fructose-1,6-bisphosphate
NP_001302992.1
XP_048609248.1
XP_048609249.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001316063.1 → NP_001302992.1  fructose-1,6-bisphosphatase, chloroplastic

    Status: PROVISIONAL

    Source sequence(s)
    L15303
    UniProtKB/Swiss-Prot
    Q07204
    UniProtKB/TrEMBL
    A0A078FJK5, A0A078J7Q8
    Conserved Domains (1) summary
    PLN02542
    Location:5 → 411
    PLN02542; fructose-1,6-bisphosphatase

RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063447.1 Reference Da-Ae Primary Assembly

    Range
    36641726..36648423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048753291.1 → XP_048609248.1  fructose-1,6-bisphosphatase, chloroplastic isoform X1

    UniProtKB/Swiss-Prot
    Q07204
    UniProtKB/TrEMBL
    A0A078FJK5, A0A078J7Q8

  2. XM_048753292.1 → XP_048609249.1  fructose-1,6-bisphosphatase, chloroplastic isoform X1

    UniProtKB/Swiss-Prot
    Q07204
    UniProtKB/TrEMBL
    A0A078FJK5, A0A078J7Q8
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q07204.1 GenPept UniProtKB/Swiss-Prot:Q07204

Gene LinkOut

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Molecular Biology Databases