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LOC106415411 polygalacturonate 4-alpha-galacturonosyltransferase [ Brassica napus (rape) ]

Gene ID: 106415411, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106415411
Gene description
polygalacturonate 4-alpha-galacturonosyltransferase
Locus tag
HID58_035820
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106415411 in Genome Data Viewer
Location:
chromosome: A9
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A9 NC_063442.1 (37320026..37323329)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A9 NC_027765.2 (36406446..36409750)

Chromosome A9 - NC_063442.1Genomic Context describing neighboring genes Neighboring gene transfer RNA leucine (anticodon AAG) Neighboring gene 40S ribosomal protein S27-2 Neighboring gene uncharacterized LOC106412655 Neighboring gene F-box/FBD/LRR-repeat protein At4g26340

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polygalacturonate 4-alpha-galacturonosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063442.1 Reference Da-Ae Primary Assembly

    Range
    37320026..37323329
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013856113.3 → XP_013711567.2  polygalacturonate 4-alpha-galacturonosyltransferase

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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