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LOC106411246 mitochondrial carnitine/acylcarnitine carrier-like protein [ Brassica napus (rape) ]

Gene ID: 106411246, updated on 10-Oct-2024

Summary

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Gene symbol
LOC106411246
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106411246 in Genome Data Viewer
Location:
chromosome: C7
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C7 NC_063450.1 (34535264..34536971, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C7 NC_027773.2 (29771414..29773071, complement)

Chromosome C7 - NC_063450.1Genomic Context describing neighboring genes Neighboring gene abscisic acid receptor PYR1 Neighboring gene uncharacterized LOC106411247 Neighboring gene transcription factor bHLH28 Neighboring gene uncharacterized LOC111207895

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063450.1 Reference Da-Ae Primary Assembly

    Range
    34535264..34536971 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013851960.3 → XP_013707414.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    UniProtKB/TrEMBL
    A0A816MGF3, A0A816SYW8
    Conserved Domains (1) summary
    pfam00153
    Location:209 → 300
    Mito_carr; Mitochondrial carrier protein

  2. XM_013851961.3 → XP_013707415.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    UniProtKB/TrEMBL
    A0A816MGF3, A0A816SYW8
    Conserved Domains (1) summary
    pfam00153
    Location:209 → 300
    Mito_carr; Mitochondrial carrier protein

  3. XM_048762396.1 → XP_048618353.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    UniProtKB/TrEMBL
    A0A816MGF3

  4. XM_013851962.3 → XP_013707416.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    UniProtKB/TrEMBL
    A0A816MGF3, A0A816SYW8
    Conserved Domains (1) summary
    pfam00153
    Location:209 → 300
    Mito_carr; Mitochondrial carrier protein

  5. XM_048762395.1 → XP_048618352.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    UniProtKB/TrEMBL
    A0A816MGF3
Nucleotide Protein
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