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LOC106406170 conserved oligomeric Golgi complex subunit 5 [ Brassica napus (rape) ]

Gene ID: 106406170, updated on 10-Oct-2024

Summary

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Gene symbol
LOC106406170
Gene description
conserved oligomeric Golgi complex subunit 5
Locus tag
HID58_072719
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106406170 in Genome Data Viewer
Location:
chromosome: C6
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C6 NC_063449.1 (40638311..40641948, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C6 NC_027772.2 (36701338..36704913, complement)

Chromosome C6 - NC_063449.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125589020 Neighboring gene uncharacterized BNAC06G29090D Neighboring gene protein POLLEN DEFECTIVE IN GUIDANCE 1 Neighboring gene binding partner of ACD11 1 Neighboring gene ABC transporter I family member 17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063449.1 Reference Da-Ae Primary Assembly

    Range
    40638311..40641948 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013846778.3 → XP_013702232.2  conserved oligomeric Golgi complex subunit 5

    UniProtKB/TrEMBL
    A0A816QUC2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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