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LOC106405495 cellulose synthase A catalytic subunit 6 [UDP-forming]-like [ Brassica napus (rape) ]

Gene ID: 106405495, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106405495
Gene description
cellulose synthase A catalytic subunit 6 [UDP-forming]-like
Locus tag
HID58_084862
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106405495 in Genome Data Viewer
Location:
chromosome: C9
Exon count:
14
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C9 NC_063452.1 (5887016..5893219)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C9 NC_027775.2 (5700532..5706693)

Chromosome C9 - NC_063452.1Genomic Context describing neighboring genes Neighboring gene egg cell-secreted protein 1.5-like Neighboring gene uncharacterized LOC125592440 Neighboring gene ethylene-responsive transcription factor ABR1-like Neighboring gene uncharacterized LOC106403267

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase A catalytic subunit 6 [UDP-forming]-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063452.1 Reference Da-Ae Primary Assembly

    Range
    5887016..5893219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013846018.3 → XP_013701472.1  cellulose synthase A catalytic subunit 6 [UDP-forming]-like

    UniProtKB/TrEMBL
    A0A078G088, A0A816IRW4
    Conserved Domains (1) summary
    PLN02436
    Location:1 → 1084
    PLN02436; cellulose synthase A

  2. XM_013846019.3 → XP_013701473.1  cellulose synthase A catalytic subunit 6 [UDP-forming]-like

    UniProtKB/TrEMBL
    A0A078G088, A0A816IRW4
    Conserved Domains (1) summary
    PLN02436
    Location:1 → 1084
    PLN02436; cellulose synthase A
Nucleotide Protein
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