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LOC106402336 endoglucanase 8 [ Brassica napus (rape) ]

Gene ID: 106402336, updated on 10-Oct-2024

Summary

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Gene symbol
LOC106402336
Gene description
endoglucanase 8
Locus tag
HID58_027560
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106402336 in Genome Data Viewer
Location:
chromosome: A7
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A7 NC_063440.1 (24585504..24592143, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C6 NC_027772.2 (39498620..39502796, complement)

Chromosome A7 - NC_063440.1Genomic Context describing neighboring genes Neighboring gene plasmodesmata-located protein 5 Neighboring gene protein TIFY 7 Neighboring gene cysteine-rich receptor-like protein kinase 43 Neighboring gene myosin-binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endoglucanase 8
Names
BnaC06g31870D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063440.1 Reference Da-Ae Primary Assembly

    Range
    24585504..24592143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013843051.3 → XP_013698505.2  endoglucanase 8

    UniProtKB/TrEMBL
    A0A816ZAJ5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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