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LOC106395656 endochitinase At2g43620 [ Brassica napus (rape) ]

Gene ID: 106395656, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106395656
Gene description
endochitinase At2g43620
Locus tag
HID58_063461
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106395656 in Genome Data Viewer
Location:
chromosome: C4
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C4 NC_063447.1 (61421811..61425569)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C4 NC_027770.2 (69318803..69319960)

Chromosome C4 - NC_063447.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125585706 Neighboring gene F-box/LRR-repeat protein At2g43260-like Neighboring gene F-box/LRR-repeat protein At2g43260-like Neighboring gene hydroxyacylglutathione hydrolase 1, mitochondrial Neighboring gene 60S ribosomal protein L38 Neighboring gene probable peroxidase 26 Neighboring gene rab GTPase-activating protein 22

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell wall macromolecule catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chitin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endochitinase At2g43620
Names
BnaC04g48920D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063447.1 Reference Da-Ae Primary Assembly

    Range
    61421811..61425569
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013836048.3 → XP_013691502.2  endochitinase At2g43620

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases