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LOC106391010 histone-arginine methyltransferase METTL23 [ Brassica napus (rape) ]

Gene ID: 106391010, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106391010
Gene description
histone-arginine methyltransferase METTL23
Locus tag
HID58_085502
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106391010 in Genome Data Viewer
Location:
chromosome: C9
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C9 NC_063452.1 (11310138..11313734, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C1 NC_027767.2 (45411111..45413592)

Chromosome C9 - NC_063452.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106390254 Neighboring gene brassinosteroid-responsive RING protein 1-like Neighboring gene small nucleolar RNA Z279/snoR105/snoR108 Neighboring gene disease resistance protein RML1B-like Neighboring gene uncharacterized LOC125592469

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-arginine methyltransferase METTL23
Names
BnaC09g11600D
methyltransferase-like protein 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063452.1 Reference Da-Ae Primary Assembly

    Range
    11310138..11313734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013831577.3 → XP_013687031.1  histone-arginine methyltransferase METTL23 isoform X2

    UniProtKB/TrEMBL
    A0A078GGJ5, A0A078HC77
    Conserved Domains (1) summary
    cl17173
    Location:26 → 171
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_013831576.3 → XP_013687030.1  histone-arginine methyltransferase METTL23 isoform X1

    UniProtKB/TrEMBL
    A0A078HC77
    Conserved Domains (1) summary
    cl17173
    Location:26 → 172
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
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