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LOC106387336 xyloglucan galactosyltransferase MUR3 [ Brassica napus (rape) ]

Gene ID: 106387336, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106387336
Gene description
xyloglucan galactosyltransferase MUR3
Locus tag
HID58_073823
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106387336 in Genome Data Viewer
Location:
chromosome: C7
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C7 NC_063450.1 (618733..621109, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) Unplaced Scaffold NW_019168585.1 (444287..446559)

Chromosome C7 - NC_063450.1Genomic Context describing neighboring genes Neighboring gene meiosis-specific protein ASY2-like Neighboring gene myb family transcription factor PHL4 Neighboring gene uncharacterized LOC106380706 Neighboring gene uncharacterized LOC106377771 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan galactosyltransferase MUR3
Names
xyloglucan galactosyltransferase KATAMARI1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063450.1 Reference Da-Ae Primary Assembly

    Range
    618733..621109 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013827169.3 → XP_013682623.1  xyloglucan galactosyltransferase MUR3

    UniProtKB/TrEMBL
    A0A816LVN5
    Conserved Domains (1) summary
    pfam03016
    Location:117 → 456
    Exostosin; Exostosin family

  2. XM_013827171.3 → XP_013682625.1  xyloglucan galactosyltransferase MUR3

    UniProtKB/TrEMBL
    A0A816LVN5
    Conserved Domains (1) summary
    pfam03016
    Location:117 → 456
    Exostosin; Exostosin family
Nucleotide Protein
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