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LOC106386012 L-ascorbate oxidase homolog [ Brassica napus (rape) ]

Gene ID: 106386012, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106386012
Gene description
L-ascorbate oxidase homolog
Locus tag
HID58_053742
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Also known as
Bplo
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Genomic context

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See LOC106386012 in Genome Data Viewer
Location:
chromosome: C3
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C3 NC_063446.1 (26754078..26756419, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C3 NC_027769.2 (38062044..38064385, complement)

Chromosome C3 - NC_063446.1Genomic Context describing neighboring genes Neighboring gene uncharacterized WD repeat-containing protein C2A9.03 Neighboring gene WPP domain-interacting protein 3 Neighboring gene L-ascorbate oxidase homolog Neighboring gene uncharacterized BNAC03G37920D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-ascorbate oxidase homolog
NP_001302824.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001315895.1 → NP_001302824.1  L-ascorbate oxidase homolog precursor

    Status: PROVISIONAL

    Source sequence(s)
    X66609
    UniProtKB/TrEMBL
    A0A816IA12, Q39323
    Conserved Domains (4) summary
    PLN02354
    Location:24 → 554
    PLN02354; copper ion binding / oxidoreductase
    cd13872
    Location:159 → 299
    CuRO_2_AAO_like_1; The second cupredoxin domain of plant pollen multicopper oxidase homologous to ascorbate oxidase
    cd13894
    Location:379 → 505
    CuRO_3_AAO_like_1; The third cupredoxin domain of plant Ascorbate oxidase homologs
    cl19115
    Location:30 → 145
    Cupredoxin; Cupredoxin superfamily

RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063446.1 Reference Da-Ae Primary Assembly

    Range
    26754078..26756419 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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