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LOC106371642 protein TIC 100-like [ Brassica napus (rape) ]

Gene ID: 106371642, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106371642
Gene description
protein TIC 100-like
Locus tag
HID58_038746
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106371642 in Genome Data Viewer
Location:
chromosome: A10
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A10 NC_063443.1 (12989804..12993861, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A10 NC_027766.2 (12002609..12009103, complement)

Chromosome A10 - NC_063443.1Genomic Context describing neighboring genes Neighboring gene glucomannan 4-beta-mannosyltransferase 2-like Neighboring gene F-box/FBD/LRR-repeat protein At5g22660-like Neighboring gene histone deacetylase HDT2-like Neighboring gene arogenate dehydratase 5, chloroplastic-like Neighboring gene stress-response A/B barrel domain-containing protein At5g22580

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein TIC 100-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063443.1 Reference Da-Ae Primary Assembly

    Range
    12989804..12993861 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048743055.1 → XP_048599012.1  protein TIC 100-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases