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LOC106370825 dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase-like [ Brassica napus (rape) ]

Gene ID: 106370825, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106370825
Gene description
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106370825 in Genome Data Viewer
Location:
chromosome: A10
Exon count:
20
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A10 NC_063443.1 (31171..34890, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A10 NC_027766.2 (5116962..5120643)

Chromosome A10 - NC_063443.1Genomic Context describing neighboring genes Neighboring gene uncharacterized BNAA10G00010D Neighboring gene cytochrome c oxidase-assembly factor COX23, mitochondrial Neighboring gene pentatricopeptide repeat-containing protein At1g02150 Neighboring gene protein mago nashi homolog Neighboring gene protein VASCULAR ASSOCIATED DEATH 1, chloroplastic Neighboring gene COP9 signalosome complex subunit 7-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063443.1 Reference Da-Ae Primary Assembly

    Range
    31171..34890 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013810799.3 → XP_013666253.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase-like

    UniProtKB/TrEMBL
    A0A817B557
    Conserved Domains (1) summary
    cl21590
    Location:15 → 370
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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