U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC106368305 probable galacturonosyltransferase 15 [ Brassica napus (rape) ]

Gene ID: 106368305, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC106368305
Gene description
probable galacturonosyltransferase 15
Locus tag
HID58_082542
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC106368305 in Genome Data Viewer
Location:
chromosome: C8
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C8 NC_063451.1 (39755203..39759564, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C8 NC_027774.2 (32130504..32134837, complement)

Chromosome C8 - NC_063451.1Genomic Context describing neighboring genes Neighboring gene integrin-linked protein kinase 1 Neighboring gene uncharacterized LOC111208836 Neighboring gene agamous-like MADS-box protein AGL1 Neighboring gene uncharacterized BNAC08G29550D Neighboring gene glutathione S-transferase T3-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable galacturonosyltransferase 15

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063451.1 Reference Da-Ae Primary Assembly

    Range
    39755203..39759564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048764788.1 → XP_048620745.1  probable galacturonosyltransferase 15 isoform X1

    UniProtKB/TrEMBL
    A0A816VF96

  2. XM_048764789.1 → XP_048620746.1  probable galacturonosyltransferase 15 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases