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LOC106343478 reticuline oxidase-like protein [ Brassica oleracea (wild cabbage) ]

Gene ID: 106343478, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106343478
Gene description
reticuline oxidase-like protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106343478 in Genome Data Viewer
Location:
chromosome: C5
Exon count:
3
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C5 NC_027752.1 (20374054..20376775)

Chromosome C5 - NC_027752.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106295957 Neighboring gene uncharacterized LOC106295956 Neighboring gene uncharacterized LOC106293808 Neighboring gene uncharacterized LOC106344731

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027752.1 Chromosome C5 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
reticuline oxidase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027752.1 Reference BOL Primary Assembly

    Range
    20374054..20376775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013782707.1 → XP_013638161.1  reticuline oxidase-like protein

    UniProtKB/TrEMBL
    A0A0D3CF01, A0A3P6EI86
    Conserved Domains (3) summary
    pfam08031
    Location:477 → 530
    BBE; Berberine and berberine like
    pfam01565
    Location:84 → 223
    FAD_binding_4; FAD binding domain
    cl40730
    Location:96 → 531
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
Nucleotide Protein
Heading Accession and Version

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