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LOC106343029 uncharacterized LOC106343029 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106343029, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106343029
Gene description
uncharacterized LOC106343029
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106343029 in Genome Data Viewer
Location:
chromosome: C4
Exon count:
13
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C4 NC_027751.1 (8086059..8089870)

Chromosome C4 - NC_027751.1Genomic Context describing neighboring genes Neighboring gene probable aspartic protease At2g35615 Neighboring gene rop guanine nucleotide exchange factor 14-like Neighboring gene protein Brevis radix-like 1 Neighboring gene uncharacterized LOC106338016

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027751.1 Chromosome C4 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arabinosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall pectin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC106343029

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027751.1 Reference BOL Primary Assembly

    Range
    8086059..8089870
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013782133.1 → XP_013637587.1  uncharacterized protein LOC106343029

    UniProtKB/TrEMBL
    A0A0D3BRR6, A0A3P6BTU5
    Conserved Domains (2) summary
    pfam03407
    Location:158 → 382
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
    cl16914
    Location:428 → 452
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
Nucleotide Protein
Heading Accession and Version

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