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LOC106342473 alpha-L-fucosidase 1 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106342473, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106342473
Gene description
alpha-L-fucosidase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106342473 in Genome Data Viewer
Location:
chromosome: C4
Exon count:
2
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C4 NC_027751.1 (44248294..44250054)

Chromosome C4 - NC_027751.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106339566 Neighboring gene uncharacterized LOC106337178 Neighboring gene probable glucuronoxylan glucuronosyltransferase IRX7 Neighboring gene glutathione S-transferase T3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027751.1 Chromosome C4 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-fucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-L-fucosidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027751.1 Reference BOL Primary Assembly

    Range
    44248294..44250054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013781418.1 → XP_013636872.1  alpha-L-fucosidase 1

    UniProtKB/TrEMBL
    A0A0D3C2H3, A0A3P6C5W9
    Conserved Domains (2) summary
    COG3669
    Location:22 → 467
    AfuC; Alpha-L-fucosidase [Carbohydrate transport and metabolism]
    cl07893
    Location:70 → 329
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein
Heading Accession and Version

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