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LOC106342336 cellulose synthase-like protein D1 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106342336, updated on 11-Sep-2024

Summary

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Gene symbol
LOC106342336
Gene description
cellulose synthase-like protein D1
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106342336 in Genome Data Viewer
Location:
chromosome: C4
Exon count:
6
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C4 NC_027751.1 (10166414..10170926)

Chromosome C4 - NC_027751.1Genomic Context describing neighboring genes Neighboring gene 3-ketoacyl-CoA thiolase 2, peroxisomal Neighboring gene vesicle-associated membrane protein 722 Neighboring gene uncharacterized LOC106338076 Neighboring gene receptor-like protein 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027751.1 Chromosome C4 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by GO

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase-like protein D1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027751.1 Reference BOL Primary Assembly

    Range
    10166414..10170926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013781242.1 → XP_013636696.1  cellulose synthase-like protein D1

    UniProtKB/TrEMBL
    A0A0D3BSK3, A0A3P6CE93
    Conserved Domains (2) summary
    PLN02248
    Location:1 → 1035
    PLN02248; cellulose synthase-like protein
    cl11394
    Location:486 → 790
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases