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LOC106337243 probable mannan synthase 15 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106337243, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106337243
Gene description
probable mannan synthase 15
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106337243 in Genome Data Viewer
Location:
chromosome: C4
Exon count:
10
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C4 NC_027751.1 (33982534..34007422)

Chromosome C4 - NC_027751.1Genomic Context describing neighboring genes Neighboring gene 3-isopropylmalate dehydratase large subunit Neighboring gene uncharacterized LOC106338709 Neighboring gene uncharacterized LOC106339519 Neighboring gene uncharacterized LOC106337264

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027751.1 Chromosome C4 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: probable mannan synthase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027751.1 Reference BOL Primary Assembly

    Range
    33982534..34007422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013776319.1 → XP_013631773.1  LOW QUALITY PROTEIN: probable mannan synthase 15

    Conserved Domains (2) summary
    pfam13641
    Location:109 → 337
    Glyco_tranf_2_3; Glycosyltransferase like family 2
    cl11394
    Location:109 → 338
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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