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LOC106336218 xyloglucan 6-xylosyltransferase 2-like [ Brassica oleracea (wild cabbage) ]

Gene ID: 106336218, updated on 11-Sep-2024

Summary

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Gene symbol
LOC106336218
Gene description
xyloglucan 6-xylosyltransferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106336218 in Genome Data Viewer
Location:
chromosome: C3
Exon count:
2
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C3 NC_027750.1 (20679809..20682153, complement)

Chromosome C3 - NC_027750.1Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase F3-like Neighboring gene glutathione S-transferase F2 Neighboring gene uncharacterized LOC106334864 Neighboring gene uncharacterized protein OsI_027940-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027750.1 Chromosome C3 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by GO

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xyloglucan 6-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xyloglucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan 6-xylosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027750.1 Reference BOL Primary Assembly

    Range
    20679809..20682153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013774979.1 → XP_013630433.1  xyloglucan 6-xylosyltransferase 2-like

    UniProtKB/TrEMBL
    A0A0D3B8T3, A0A3P6B5Z3, A0A3P6DVE2
    Conserved Domains (1) summary
    PLN03182
    Location:1 → 455
    PLN03182; xyloglucan 6-xylosyltransferase; Provisional
Nucleotide Protein
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