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LOC106335127 beta-glucosidase 3-like [ Brassica oleracea (wild cabbage) ]

Gene ID: 106335127, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106335127
Gene description
beta-glucosidase 3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106335127 in Genome Data Viewer
Location:
chromosome: C3
Exon count:
13
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C3 NC_027750.1 (15984424..15987389, complement)

Chromosome C3 - NC_027750.1Genomic Context describing neighboring genes Neighboring gene UDP-glucuronic acid decarboxylase 4-like Neighboring gene universal stress protein A-like protein Neighboring gene glutathione S-transferase F8, chloroplastic-like Neighboring gene cytoplasmic 60S subunit biogenesis factor REI1 homolog Neighboring gene nuclear transcription factor Y subunit B-5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027750.1 Chromosome C3 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-glucosidase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027750.1 Reference BOL Primary Assembly

    Range
    15984424..15987389 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013773560.1 → XP_013629014.1  beta-glucosidase 3-like isoform X1

    UniProtKB/TrEMBL
    A0A0D3B751, A0A3P6AE26
    Conserved Domains (1) summary
    cl23725
    Location:19 → 516
    Glyco_hydro_1; Glycosyl hydrolase family 1

  2. XM_013773561.1 → XP_013629015.1  beta-glucosidase 3-like isoform X2

    Conserved Domains (1) summary
    cl23725
    Location:27 → 365
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
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