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LOC106335074 cytosolic endo-beta-N-acetylglucosaminidase 1 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106335074, updated on 11-Sep-2024

Summary

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Gene symbol
LOC106335074
Gene description
cytosolic endo-beta-N-acetylglucosaminidase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106335074 in Genome Data Viewer
Location:
chromosome: C3
Exon count:
11
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C3 NC_027750.1 (1141685..1145472)

Chromosome C3 - NC_027750.1Genomic Context describing neighboring genes Neighboring gene cytochrome b-c1 complex subunit 8-like Neighboring gene abscisic acid receptor PYL5-like Neighboring gene peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A Neighboring gene putative F-box protein At3g22650 Neighboring gene anaphase-promoting complex subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027750.1 Chromosome C3 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by GO

Function Evidence Code Pubs
enables mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deglycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic endo-beta-N-acetylglucosaminidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027750.1 Reference BOL Primary Assembly

    Range
    1141685..1145472
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013773498.1 → XP_013628952.1  cytosolic endo-beta-N-acetylglucosaminidase 1

    UniProtKB/TrEMBL
    A0A0D3AZU9, A0A3P5ZWP2
    Conserved Domains (1) summary
    cd06547
    Location:69 → 382
    GH85_ENGase; Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins. The beta-1,4-glycosyl bond located between two N-acetylglucosamine residues is hydrolyzed such that N-acetylglucosamine 1 remains with the ...
Nucleotide Protein
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Molecular Biology Databases