U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC106327760 UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106327760, updated on 30-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC106327760
Gene description
UDP-glucuronate:xylan alpha-glucuronosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC106327760 in Genome Data Viewer
Location:
chromosome: C1
Exon count:
4
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C1 NC_027748.1 (2868493..2872463)

Chromosome C1 - NC_027748.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106324287 Neighboring gene protein TIC 22, chloroplastic-like Neighboring gene probable disease resistance protein At4g33300 Neighboring gene uncharacterized LOC106306278

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_027748.1 Chromosome C1 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
UDP-glucuronate:xylan alpha-glucuronosyltransferase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027748.1 Reference BOL Primary Assembly

    Range
    2868493..2872463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013766009.1 → XP_013621463.1  UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A0D3A297
    Conserved Domains (2) summary
    cd02537
    Location:311 → 555
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
    COG1442
    Location:386 → 521
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]

  2. XM_013766017.1 → XP_013621471.1  UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 isoform X2

    Conserved Domains (2) summary
    cd02537
    Location:230 → 474
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
    COG1442
    Location:305 → 440
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases