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LOC106327184 probable galacturonosyltransferase 4 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106327184, updated on 11-Jan-2024

Summary

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Gene symbol
LOC106327184
Gene description
probable galacturonosyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106327184 in Genome Data Viewer
Location:
chromosome: C2
Exon count:
9
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C2 NC_027749.1 (41625095..41628128)

Chromosome C2 - NC_027749.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106324262 Neighboring gene subtilisin-like protease SBT5.4 Neighboring gene protein PHR1-LIKE 1-like Neighboring gene protein YLS9-like Neighboring gene fasciclin-like arabinogalactan protein 19

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027749.1 Chromosome C2 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027749.1 Reference BOL Primary Assembly

    Range
    41625095..41628128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013765258.1 → XP_013620712.1  probable galacturonosyltransferase 4 isoform X1

    UniProtKB/TrEMBL
    A0A0D3AV21
    Conserved Domains (2) summary
    cd06429
    Location:320 → 614
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02829
    Location:1 → 627
    PLN02829; Probable galacturonosyltransferase

  2. XM_013765259.1 → XP_013620713.1  probable galacturonosyltransferase 4 isoform X2

    Conserved Domains (2) summary
    cd06429
    Location:319 → 613
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02829
    Location:1 → 626
    PLN02829; Probable galacturonosyltransferase
Nucleotide Protein
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