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LOC106320810 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106320810, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106320810
Gene description
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106320810 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) Unplaced Scaffold NW_013617642.1 (12570..15120)

NW_013617642.1Genomic Context describing neighboring genes Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene probable glucuronosyltransferase Os04g0398600 Neighboring gene bidirectional sugar transporter SWEET1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013617642.1 Unplaced Scaffold Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NW_013617642.1 Reference BOL Primary Assembly

    Range
    12570..15120
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013759161.1 → XP_013614615.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3

    UniProtKB/TrEMBL
    A0A0D2ZTF6, A0A3P6G8V2
    Conserved Domains (2) summary
    cd02537
    Location:312 → 557
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
    COG1442
    Location:387 → 574
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version

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