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LOC106320465 laccase-11 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106320465, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106320465
Gene description
laccase-11
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106320465 in Genome Data Viewer
Location:
chromosome: C2
Exon count:
7
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C2 NC_027749.1 (596623..599030, complement)

Chromosome C2 - NC_027749.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106325970 Neighboring gene mediator of RNA polymerase II transcription subunit 7a Neighboring gene probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG6 Neighboring gene isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027749.1 Chromosome C2 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroquinone:oxygen oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lignin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laccase-11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027749.1 Reference BOL Primary Assembly

    Range
    596623..599030 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013758838.1 → XP_013614292.1  laccase-11

    UniProtKB/TrEMBL
    A0A0D3AHK9, A0A3P6D5G1
    Conserved Domains (1) summary
    TIGR03389
    Location:26 → 560
    laccase; plant
Nucleotide Protein
Heading Accession and Version

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