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LOC106320014 beta-amylase 8 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106320014, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106320014
Gene description
beta-amylase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106320014 in Genome Data Viewer
Location:
chromosome: C2
Exon count:
10
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C2 NC_027749.1 (39136210..39139558)

Chromosome C2 - NC_027749.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106324194 Neighboring gene pectin acetylesterase 11 Neighboring gene uncharacterized LOC106326007 Neighboring gene decapping 5-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027749.1 Chromosome C2 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-amylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in polysaccharide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-amylase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027749.1 Reference BOL Primary Assembly

    Range
    39136210..39139558
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013758384.1 → XP_013613838.1  beta-amylase 8

    UniProtKB/TrEMBL
    A0A0D3AUA1, A0A3P6DCU7
    Conserved Domains (1) summary
    PLN02705
    Location:1 → 676
    PLN02705; beta-amylase
Nucleotide Protein
Heading Accession and Version

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