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LOC106319497 probable galacturonosyltransferase 14 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106319497, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106319497
Gene description
probable galacturonosyltransferase 14
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106319497 in Genome Data Viewer
Location:
chromosome: C9
Exon count:
6
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C9 NC_027756.1 (48518829..48522109)

Chromosome C9 - NC_027756.1Genomic Context describing neighboring genes Neighboring gene biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic-like Neighboring gene UDP-glucose 6-dehydrogenase 3-like Neighboring gene MATH domain and coiled-coil domain-containing protein At3g58210-like Neighboring gene chaperone protein ClpB3, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027756.1 Chromosome C9 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027756.1 Reference BOL Primary Assembly

    Range
    48518829..48522109
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013757844.1 → XP_013613298.1  probable galacturonosyltransferase 14 isoform X2

    UniProtKB/TrEMBL
    A0A3P6AAC2
    Conserved Domains (2) summary
    PLN02870
    Location:2 → 516
    PLN02870; Probable galacturonosyltransferase
    cl11394
    Location:191 → 503
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_013757843.1 → XP_013613297.1  probable galacturonosyltransferase 14 isoform X1

    UniProtKB/TrEMBL
    A0A0D3EFB0, A0A3P6AAC2, A0A3P6EEC6
    Conserved Domains (1) summary
    cl28622
    Location:2 → 524
    PLN02870; Probable galacturonosyltransferase
Nucleotide Protein
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