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LOC106317815 alpha-mannosidase [ Brassica oleracea (wild cabbage) ]

Gene ID: 106317815, updated on 11-Sep-2024

Summary

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Gene symbol
LOC106317815
Gene description
alpha-mannosidase
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106317815 in Genome Data Viewer
Location:
chromosome: C9
Exon count:
23
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C9 NC_027756.1 (6759225..6765138)

Chromosome C9 - NC_027756.1Genomic Context describing neighboring genes Neighboring gene calcium-dependent protein kinase 28 Neighboring gene ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic Neighboring gene proteasome subunit alpha type-7-B Neighboring gene cell cycle checkpoint protein RAD17

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027756.1 Chromosome C9 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by GO

Function Evidence Code Pubs
enables alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-mannosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027756.1 Reference BOL Primary Assembly

    Range
    6759225..6765138
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013755586.1 → XP_013611040.1  alpha-mannosidase

    UniProtKB/TrEMBL
    A0A0D3E2R2, A0A3P6DPY4
    Conserved Domains (3) summary
    cd10810
    Location:39 → 315
    GH38N_AMII_LAM_like; N-terminal catalytic domain of lysosomal alpha-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38)
    smart00872
    Location:358 → 431
    Alpha-mann_mid; Alpha mannosidase, middle domain
    pfam07748
    Location:486 → 1006
    Glyco_hydro_38C; Glycosyl hydrolases family 38 C-terminal domain
Nucleotide Protein
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