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LOC106307787 putative fucosyltransferase-like protein [ Brassica oleracea (wild cabbage) ]

Gene ID: 106307787, updated on 30-Oct-2024

Summary

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Gene symbol
LOC106307787
Gene description
putative fucosyltransferase-like protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106307787 in Genome Data Viewer
Location:
chromosome: C8
Exon count:
7
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C8 NC_027755.1 (2112868..2115412, complement)

Chromosome C8 - NC_027755.1Genomic Context describing neighboring genes Neighboring gene probable carboxylesterase 4 Neighboring gene zinc-binding alcohol dehydrogenase domain-containing protein 2 Neighboring gene PI-PLC X domain-containing protein At5g67130-like Neighboring gene uncharacterized LOC106311584

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027755.1 Chromosome C8 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative fucosyltransferase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027755.1 Reference BOL Primary Assembly

    Range
    2112868..2115412 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013744838.1 → XP_013600292.1  putative fucosyltransferase-like protein

    UniProtKB/TrEMBL
    A0A0D3DJH2, A0A3P6G961
    Conserved Domains (1) summary
    pfam00852
    Location:215 → 378
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
Nucleotide Protein
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