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LOC106306822 pectinesterase 31 [ Brassica oleracea (wild cabbage) ]

Gene ID: 106306822, updated on 11-Sep-2024

Summary

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Gene symbol
LOC106306822
Gene description
pectinesterase 31
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106306822 in Genome Data Viewer
Location:
chromosome: C7
Exon count:
6
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C7 NC_027754.1 (33827882..33830007)

Chromosome C7 - NC_027754.1Genomic Context describing neighboring genes Neighboring gene transmembrane emp24 domain-containing protein p24delta11 Neighboring gene uncharacterized protein At5g39570 Neighboring gene kxDL motif-containing protein 1 Neighboring gene zinc finger MYM-type protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027754.1 Chromosome C7 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by GO

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pectinesterase 31

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027754.1 Reference BOL Primary Assembly

    Range
    33827882..33830007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013743581.1 → XP_013599035.1  pectinesterase 31 isoform X1

    UniProtKB/TrEMBL
    A0A0D3DBH0
    Conserved Domains (1) summary
    PLN02773
    Location:1 → 317
    PLN02773; pectinesterase

  2. XM_013743582.1 → XP_013599036.1  pectinesterase 31 isoform X2

    Conserved Domains (2) summary
    PLN02432
    Location:1 → 270
    PLN02432; putative pectinesterase
    PLN02773
    Location:1 → 282
    PLN02773; pectinesterase
Nucleotide Protein
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